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Phylogenetic Tree
Software
MEGA
free
3,102
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, and Kumar S
MEGA is an integrated tool for conducting automatic and manual sequence alignment, inferring phylogenetic...
manual sequence alignment, inferring
phylogenetic
trees
, mining web-based
Geneious
2,057
Biomatters Ltd.
Geneious is a research tool designed for biologists and not computer...
calling. Streamlined microsatellite genotyping.
Tree
building and viewing
TreeView
free
1,934
Roderic D. M. Page
TreeView is a program to view phylogenetic trees in your computer. It can read and display...
a program to view
phylogenetic
trees
in your computer. A
phylogenetic
tree
is a graphical
Jalview
free
1,619
The Barton Group
Jalview is a free program for multiple sequence alignment editing...
alignments, analyze them with
phylogenetic
trees
and principal components
TreeView X
free
1,542
Roderic D. M. Page
TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms...
program to display
phylogenetic
trees
on Linux, Unix...by PAUP*, ClustalX,
TREE
-PUZZLE
CodonCode Aligner
1,374
CodonCode Corporation
CodonCode Aligner is a software program that targets genetics research, a domain with high complexity...
and deletions or generate
phylogenetic
trees
and restriction maps
Unipro UGENE
free
1,229
Unipro, Russia
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires...
and PSIPRED; -
Phylogenetic
analysis with Phylip...mode support; -
Phylogenetic
tree
viewer; -Dot
Dendroscope
free
298
Daniel H. Huson
Dendroscope is a platform-independent app written in Java...
enables conveniently to browse
phylogenetic
trees
and networks with up
mrbayes32
free
179
The Swedish Museum of Natural History
MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic...
wide range of
phylogenetic
...majority rule consensus
trees
in FigTree
SplitsTree4
free
126
Center for Bioinformatics Tübingen
Given an alignment of sequences, a distance matrix or a set of trees, the program will compute...
computing unrooted
phylogenetic
networks...of
trees
, the program will compute a
phylogenetic
tree
TOPALi
free
79
Biomathematics & Statistics Scotland
TOPALi provides an intuitive graphical interface for working with existing...
including the creation of
Phylogenetic
trees
, mosaic structure predictions
NeXplorer
free
41
astoltzfus, vivekgopalan
Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data...
Nexplorer is a web-based
phylogenetic
browser ...the tips of a
tree
are aligned
PAUP*
41
David Swofford
PAUP* is a new release of the software package for inference of evolutionary trees...
inference of evolutionary
trees
...comprehensive introduction to
phylogenetic
TreeMe
18
SequentiX - Digital DNA Processing
TreeMe allows visualization, editing, and annotation of large phylogenetic...
annotation of large
phylogenetic
trees
...of several
trees
onto a single
tree
. You get
NJPLOT
free
14
M. Gouy
NJplot is a tree drawing program capable of drawing any phylogenetic tree expressed...
phylogenetic
tree
expressed in the Newick
phylogenetic
tree
...the unrooted
trees
BAMBE
free
7
Donald Simon & Bret Larget, Department of Mathematics and Computer Science, Duquesne University.
Bayesian Analysis in Molecular Biology and Evolution (BAMBE) is a free software package...
posterior distribution of
phylogenetic
trees
and likelihood...the sampled
trees
and parameter
PoInTree - Polar and Interactive Tree
free
Nerviano Medical Sciences,GeneProject
PoInTree (Polar and Interactive Tree) is an application that allows to build, visualize and customize...
visualize and customize
phylogenetic
trees
in a polar...flexible view.
Phylogenetic
tree
calculation
Tags
Phylogenetic trees
Analysis
Phylogenetic
Sequence alignment
DNA sequence
Data
Matrix
Biology
Sequence
Treeview
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